08 marca 2016

Fwd: PNAS Section Alert for March 8, 2016

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From: <pnas-mailer@alerts.highwire.org>
Date: Wed, Mar 9, 2016 at 5:59 AM
Subject: PNAS Section Alert for March 8, 2016
To: pascal.alter@gmail.com


PNAS    Proceedings of the National Academy of Sciences
Agricultural Sciences
Impaired imprinted X chromosome inactivation is responsible for the skewed sex ratio following in vitro fertilization
Kun Tan, Lei An, Kai Miao, Likun Ren, Zhuocheng Hou, Li Tao, Zhenni Zhang, Xiaodong Wang, Wei Xia, Jinghao Liu, Zhuqing Wang, Guangyin Xi, Shuai Gao, Linlin Sui, De-Sheng Zhu, Shumin Wang, Zhonghong Wu, Ingolf Bach, Dong-bao Chen, and Jianhui Tian
A mutualistic symbiosis between a parasitic mite and a pathogenic virus undermines honey bee immunity and health Open Access Article
Gennaro Di Prisco, Desiderato Annoscia, Marina Margiotta, Rosalba Ferrara, Paola Varricchio, Virginia Zanni, Emilio Caprio, Francesco Nazzi, and Francesco Pennacchio

Genetics
LNA modification of single-stranded DNA oligonucleotides allows subtle gene modification in mismatch-repair-proficient cells
Thomas W. van Ravesteyn, Marleen Dekker, Alexander Fish, Titia K. Sixma, Astrid Wolters, Rob J. Dekker, and Hein P. J. te Riele
Whole-exome sequencing identifies MST1R as a genetic susceptibility gene in nasopharyngeal carcinoma
Wei Dai, Hong Zheng, Arthur Kwok Leung Cheung, Clara Sze-man Tang, Josephine Mun Yee Ko, Bonnie Wing Yan Wong, Merrin Man Long Leong, Pak Chung Sham, Florence Cheung, Dora Lai-Wan Kwong, Roger Kai Cheong Ngan, Wai Tong Ng, Chun Chung Yau, Jianji Pan, Xun Peng, Stewart Tung, Zengfeng Zhang, Mingfang Ji, Alan Kwok-Shing Chiang, Anne Wing-Mui Lee, Victor Ho-fun Lee, Ka-On Lam, Kwok Hung Au, Hoi Ching Cheng, Harry Ho-Yin Yiu, and Maria Li Lung
Oligonucleotide-directed mutagenesis screen to identify pathogenic Lynch syndrome-associated MSH2 DNA mismatch repair gene variants
Hellen Houlleberghs, Marleen Dekker, Hildo Lantermans, Roos Kleinendorst, Hendrikus Jan Dubbink, Robert M. W. Hofstra, Senno Verhoef, and Hein te Riele

Anthropology
Polygyny and child health revisited
Matthias Rieger and Natascha Wagner
Reply to Rieger and Wagner: Context matters when studying purportedly harmful cultural practices
David W. Lawson, Susan James, Esther Ngadaya, Bernard Ngowi, Sayoki G. M. Mfinanga, and Monique Borgerhoff Mulder

Immunology and Inflammation
Autoantibody-boosted T-cell reactivation in the target organ triggers manifestation of autoimmune CNS disease
Anne-Christine Flach, Tanja Litke, Judith Strauss, Michael Haberl, César Cordero Gómez, Markus Reindl, Albert Saiz, Hans-Jörg Fehling, Jürgen Wienands, Francesca Odoardi, Fred Lühder, and Alexander Flügel
Sialic acid-modified antigens impose tolerance via inhibition of T-cell proliferation and de novo induction of regulatory T cells Open Access Article
Maurizio Perdicchio, Juan M. Ilarregui, Marleen I. Verstege, Lenneke A. M. Cornelissen, Sjoerd T. T. Schetters, Steef Engels, Martino Ambrosini, Hakan Kalay, Henrike Veninga, Joke M. M. den Haan, Lisette A. van Berkel, Janneke N. Samsom, Paul R. Crocker, Tim Sparwasser, Luciana Berod, Juan J. Garcia-Vallejo, Yvette van Kooyk, and Wendy W. J. Unger
Cell-type–restricted anti-cytokine therapy: TNF inhibition from one pathogenic source
Grigory A. Efimov, Andrei A. Kruglov, Zoya V. Khlopchatnikova, Fedor N. Rozov, Vladislav V. Mokhonov, Stefan Rose-John, Jürgen Scheller, Siamon Gordon, Martin Stacey, Marina S. Drutskaya, Sergei V. Tillib, and Sergei A. Nedospasov

Applied Biological Sciences
Morphogenesis of 3D vascular networks is regulated by tensile forces
Dekel Rosenfeld, Shira Landau, Yulia Shandalov, Noa Raindel, Alina Freiman, Erez Shor, Yaron Blinder, Herman H. Vandenburgh, David J. Mooney, and Shulamit Levenberg
Overcoming heterologous protein interdependency to optimize P450-mediated Taxol precursor synthesis in Escherichia coli
Bradley Walters Biggs, Chin Giaw Lim, Kristen Sagliani, Smriti Shankar, Gregory Stephanopoulos, Marjan De Mey, and Parayil Kumaran Ajikumar
Integrated bioprocess for conversion of gaseous substrates to liquids
Peng Hu, Sagar Chakraborty, Amit Kumar, Benjamin Woolston, Hongjuan Liu, David Emerson, and Gregory Stephanopoulos

Applied Physical Sciences
Energy landscape in protein folding and unfolding
Francesco Mallamace, Carmelo Corsaro, Domenico Mallamace, Sebastiano Vasi, Cirino Vasi, Piero Baglioni, Sergey V. Buldyrev, Sow-Hsin Chen, and H. Eugene Stanley

Microbiology
Human symbionts inject and neutralize antibacterial toxins to persist in the gut Open Access Article
Aaron G. Wexler, Yiqiao Bao, John C. Whitney, Louis-Marie Bobay, Joao B. Xavier, Whitman B. Schofield, Natasha A. Barry, Alistair B. Russell, Bao Q. Tran, Young Ah Goo, David R. Goodlett, Howard Ochman, Joseph D. Mougous, and Andrew L. Goodman
The source of high signal cooperativity in bacterial chemosensory arrays
Germán E. Piñas, Vered Frank, Ady Vaknin, and John S. Parkinson
ppGpp negatively impacts ribosome assembly affecting growth and antimicrobial tolerance in Gram-positive bacteria Open Access Article
Rebecca M. Corrigan, Lauren E. Bellows, Alison Wood, and Angelika Gründling

Neuroscience
Neuronal profilins in health and disease: Relevance for spine plasticity and Fragile X syndrome
Kristin Michaelsen-Preusse, Sabine Zessin, Gayane Grigoryan, Franziska Scharkowski, Jonas Feuge, Anita Remus, and Martin Korte
PP2A methylation controls sensitivity and resistance to β-amyloid–induced cognitive and electrophysiological impairments
Russell E. Nicholls, Jean-Marie Sontag, Hong Zhang, Agnieszka Staniszewski, Shijun Yan, Carla Y. Kim, Michael Yim, Caitlin M. Woodruff, Erland Arning, Brandi Wasek, Deqi Yin, Teodoro Bottiglieri, Estelle Sontag, Eric R. Kandel, and Ottavio Arancio
Behavioral response inhibition and maturation of goal representation in prefrontal cortex after puberty
Xin Zhou, Dantong Zhu, Samson G. King, Cynthia J. Lees, Allyson J. Bennett, Emilio Salinas, Terrence R. Stanford, and Christos Constantinidis
Assessing the sensitivity of diffusion MRI to detect neuronal activity directly
Ruiliang Bai, Craig V. Stewart, Dietmar Plenz, and Peter J. Basser

Biochemistry
Dual function of C/D box small nucleolar RNAs in rRNA modification and alternative pre-mRNA splicing
Marina Falaleeva, Amadis Pages, Zaneta Matuszek, Sana Hidmi, Lily Agranat-Tamir, Konstantin Korotkov, Yuval Nevo, Eduardo Eyras, Ruth Sperling, and Stefan Stamm
Rapid expansion of the protein disulfide isomerase gene family facilitates the folding of venom peptides
Helena Safavi-Hemami, Qing Li, Ronneshia L. Jackson, Albert S. Song, Wouter Boomsma, Pradip K. Bandyopadhyay, Christian W. Gruber, Anthony W. Purcell, Mark Yandell, Baldomero M. Olivera, and Lars Ellgaard
Posttranslational regulation of coordinated enzyme activities in the Pup-proteasome system
Yifat Elharar, Ziv Roth, Nir Hecht, Ron Rotkopf, Isam Khalaila, and Eyal Gur
Conformational dynamics of a membrane protein chaperone enables spatially regulated substrate capture and release
Fu-Cheng Liang, Gerard Kroon, Camille Z. McAvoy, Chris Chi, Peter E. Wright, and Shu-ou Shan
Novel family of terpene synthases evolved from trans-isoprenyl diphosphate synthases in a flea beetle
Franziska Beran, Peter Rahfeld, Katrin Luck, Raimund Nagel, Heiko Vogel, Natalie Wielsch, Sandra Irmisch, Srinivasan Ramasamy, Jonathan Gershenzon, David G. Heckel, and Tobias G. Köllner

Biophysics and Computational Biology
Atomic resolution probe for allostery in the regulatory thin filament
Michael R. Williams, Sarah J. Lehman, Jil C. Tardiff, and Steven D. Schwartz
Orange carotenoid protein burrows into the phycobilisome to provide photoprotection
Dvir Harris, Ofir Tal, Denis Jallet, Adjélé Wilson, Diana Kirilovsky, and Noam Adir
Energy landscape in protein folding and unfolding
Francesco Mallamace, Carmelo Corsaro, Domenico Mallamace, Sebastiano Vasi, Cirino Vasi, Piero Baglioni, Sergey V. Buldyrev, Sow-Hsin Chen, and H. Eugene Stanley
Population-based 3D genome structure analysis reveals driving forces in spatial genome organization Open Access Article
Harianto Tjong, Wenyuan Li, Reza Kalhor, Chao Dai, Shengli Hao, Ke Gong, Yonggang Zhou, Haochen Li, Xianghong Jasmine Zhou, Mark A. Le Gros, Carolyn A. Larabell, Lin Chen, and Frank Alber
Noise-driven growth rate gain in clonal cellular populations
Mikihiro Hashimoto, Takashi Nozoe, Hidenori Nakaoka, Reiko Okura, Sayo Akiyoshi, Kunihiko Kaneko, Edo Kussell, and Yuichi Wakamoto
Dynamic control of strand excision during human DNA mismatch repair Open Access Article
Yongmoon Jeon, Daehyung Kim, Juana V. Martín-López, Ryanggeun Lee, Jungsic Oh, Jeungphill Hanne, Richard Fishel, and Jong-Bong Lee
Structure and mechanism of the phage T4 recombination mediator protein UvsY Open Access Article
Stefan Gajewski, Michael Brett Waddell, Sivaraja Vaithiyalingam, Amanda Nourse, Zhenmei Li, Nils Woetzel, Nathan Alexander, Jens Meiler, and Stephen W. White
Blocking rapid ice crystal growth through nonbasal plane adsorption of antifreeze proteins Open Access Article
Luuk L. C. Olijve, Konrad Meister, Arthur L. DeVries, John G. Duman, Shuaiqi Guo, Huib J. Bakker, and Ilja K. Voets

Physics
Quantum communication complexity advantage implies violation of a Bell inequality
Harry Buhrman, Łukasz Czekaj, Andrzej Grudka, Michał Horodecki, Paweł Horodecki, Marcin Markiewicz, Florian Speelman, and Sergii Strelchuk

Cell Biology
Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells
Yurong Xin, Jinrang Kim, Min Ni, Yi Wei, Haruka Okamoto, Joseph Lee, Christina Adler, Katie Cavino, Andrew J. Murphy, George D. Yancopoulos, Hsin Chieh Lin, and Jesper Gromada

Physiology
Forkhead box A3 mediates glucocorticoid receptor function in adipose tissue Open Access Article
Xinran Ma, Lingyan Xu, and Elisabetta Mueller

Chemistry
Necessity of capillary modes in a minimal model of nanoscale hydrophobic solvation
Suriyanarayanan Vaikuntanathan, Grant Rotskoff, Alexander Hudson, and Phillip L. Geissler
Blocking rapid ice crystal growth through nonbasal plane adsorption of antifreeze proteins Open Access Article
Luuk L. C. Olijve, Konrad Meister, Arthur L. DeVries, John G. Duman, Shuaiqi Guo, Huib J. Bakker, and Ilja K. Voets

Plant Biology
Cell-to-cell movement of mitochondria in plants Open Access Article
Csanad Gurdon, Zora Svab, Yaping Feng, Dibyendu Kumar, and Pal Maliga
NbCSPR underlies age-dependent immune responses to bacterial cold shock protein in Nicotiana benthamiana
Isabel M. L. Saur, Yasuhiro Kadota, Jan Sklenar, Nicholas J. Holton, Elwira Smakowska, Youssef Belkhadir, Cyril Zipfel, and John P. Rathjen

Computer Sciences
Computer vision cracks the leaf code
Peter Wilf, Shengping Zhang, Sharat Chikkerur, Stefan A. Little, Scott L. Wing, and Thomas Serre

Earth, Atmospheric, and Planetary Sciences
Deciphering ocean carbon in a changing world Open Access Article
Mary Ann Moran, Elizabeth B. Kujawinski, Aron Stubbins, Rob Fatland, Lihini I. Aluwihare, Alison Buchan, Byron C. Crump, Pieter C. Dorrestein, Sonya T. Dyhrman, Nancy J. Hess, Bill Howe, Krista Longnecker, Patricia M. Medeiros, Jutta Niggemann, Ingrid Obernosterer, Daniel J. Repeta, and Jacob R. Waldbauer
Reduced interdecadal variability of Atlantic Meridional Overturning Circulation under global warming Open Access Article
Jun Cheng, Zhengyu Liu, Shaoqing Zhang, Wei Liu, Lina Dong, Peng Liu, and Hongli Li
Shipwreck rates reveal Caribbean tropical cyclone response to past radiative forcing
Valerie Trouet, Grant L. Harley, and Marta Domínguez-Delmás
Satellite retrieval of cloud condensation nuclei concentrations by using clouds as CCN chambers
Daniel Rosenfeld, Youtong Zheng, Eyal Hashimshoni, Mira L. Pöhlker, Anne Jefferson, Christopher Pöhlker, Xing Yu, Yannian Zhu, Guihua Liu, Zhiguo Yue, Baruch Fischman, Zhanqing Li, David Giguzin, Tom Goren, Paulo Artaxo, Henrique M. J. Barbosa, Ulrich Pöschl, and Meinrat O. Andreae

Psychological and Cognitive Sciences
Infants ask for help when they know they don't know Open Access Article
Louise Goupil, Margaux Romand-Monnier, and Sid Kouider

Ecology
Reply to Szuwalski: Recognizing ecological income inequality in the ocean
Gregory L. Britten, Michael Dowd, and Boris Worm
Discovery of a spawning ground reveals diverse migration strategies in Atlantic bluefin tuna (Thunnus thynnus) Open Access Article
David E. Richardson, Katrin E. Marancik, Jeffrey R. Guyon, Molly E. Lutcavage, Benjamin Galuardi, Chi Hin Lam, Harvey J. Walsh, Sharon Wildes, Douglas A. Yates, and Jonathan A. Hare

Social Sciences
Polygyny and child health revisited
Matthias Rieger and Natascha Wagner
Reply to Rieger and Wagner: Context matters when studying purportedly harmful cultural practices
David W. Lawson, Susan James, Esther Ngadaya, Bernard Ngowi, Sayoki G. M. Mfinanga, and Monique Borgerhoff Mulder

Engineering
Three-dimensional bioprinting of thick vascularized tissues Open Access Article
David B. Kolesky, Kimberly A. Homan, Mark A. Skylar-Scott, and Jennifer A. Lewis
Layered hydrogels accelerate iPSC-derived neuronal maturation and reveal migration defects caused by MeCP2 dysfunction Open Access Article
Zhen-Ning Zhang, Beatriz C. Freitas, Hao Qian, Jacques Lux, Allan Acab, Cleber A. Trujillo, Roberto H. Herai, Viet Anh Nguyen Huu, Jessica H. Wen, Shivanjali Joshi-Barr, Jerome V. Karpiak, Adam J. Engler, Xiang-Dong Fu, Alysson R. Muotri, and Adah Almutairi

Sustainability Science
Reply to Szuwalski: Recognizing ecological income inequality in the ocean
Gregory L. Britten, Michael Dowd, and Boris Worm
Analysis of data on endangered species consultations reveals nothing regarding their economic impacts
Paul S. Weiland, Alan Glen, Sue Meyer, Steve Quarles, Robert Thornton, and Brooke Wahlberg

Environmental Sciences
Deciphering ocean carbon in a changing world Open Access Article
Mary Ann Moran, Elizabeth B. Kujawinski, Aron Stubbins, Rob Fatland, Lihini I. Aluwihare, Alison Buchan, Byron C. Crump, Pieter C. Dorrestein, Sonya T. Dyhrman, Nancy J. Hess, Bill Howe, Krista Longnecker, Patricia M. Medeiros, Jutta Niggemann, Ingrid Obernosterer, Daniel J. Repeta, and Jacob R. Waldbauer

Systems Biology
Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro kcat measurements Open Access Article
Dan Davidi, Elad Noor, Wolfram Liebermeister, Arren Bar-Even, Avi Flamholz, Katja Tummler, Uri Barenholz, Miki Goldenfeld, Tomer Shlomi, and Ron Milo

Evolution
Computer vision cracks the leaf code
Peter Wilf, Shengping Zhang, Sharat Chikkerur, Stefan A. Little, Scott L. Wing, and Thomas Serre
Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses
Richard A. Neher, Trevor Bedford, Rodney S. Daniels, Colin A. Russell, and Boris I. Shraiman

Perspectives
Deciphering ocean carbon in a changing world Open Access Article
Mary Ann Moran, Elizabeth B. Kujawinski, Aron Stubbins, Rob Fatland, Lihini I. Aluwihare, Alison Buchan, Byron C. Crump, Pieter C. Dorrestein, Sonya T. Dyhrman, Nancy J. Hess, Bill Howe, Krista Longnecker, Patricia M. Medeiros, Jutta Niggemann, Ingrid Obernosterer, Daniel J. Repeta, and Jacob R. Waldbauer

In This Issue

Letters and Replies
Reply to Szuwalski: Recognizing ecological income inequality in the ocean
Gregory L. Britten, Michael Dowd, and Boris Worm
Polygyny and child health revisited
Matthias Rieger and Natascha Wagner
Reply to Rieger and Wagner: Context matters when studying purportedly harmful cultural practices
David W. Lawson, Susan James, Esther Ngadaya, Bernard Ngowi, Sayoki G. M. Mfinanga, and Monique Borgerhoff Mulder
Analysis of data on endangered species consultations reveals nothing regarding their economic impacts
Paul S. Weiland, Alan Glen, Sue Meyer, Steve Quarles, Robert Thornton, and Brooke Wahlberg

Open Access
From the Cover
Inaugural Article
Classic
Cozzarelli Prize Winner
Front Matter

This message was sent to pascal.alter@gmail.com.
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Copyright © 2016 by the National Academy of Sciences

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